Gongora is a powerful sorcerer, one of the five Immortals sent to this world in order to discover what is eroding theirs. After a thousand years, he becomes twisted by his own emotions and tries to remain in this world to become its ruler. He starts by sealing the memories of the other four Immortals and puts them in positions for later use. He is an important part of early portion in the game's storyline by acting as a member of the Council. Gongora assigns Jansen to join Kaim and Seth on their first mission to investigate Grand Staff. He gives Jansen the order to, if Kaim or Seth recover any of their memories, hit them with a magic pearl which will induce further amnesia; offering Jansen triple his pay to do so.
Gongora manipulates Tolten further in the game, pushing him to inadvertently kill the head of the Uhran Council, Roxian, to reinstate the monarchy. Unbeknownst to Tolten, the person he killed was just a puppet of Gongora. After killing the head of the Council himself, Gongora manipulates Tolten to broadcast to the world that Tolten will be assuming the throne as the new king of Uhra. Tolten, naively believing that Gongora is a sincere adviser, makes Gongora his second in command.
Not long after Gongora is appointed as Totlen's adviser - during a meeting Tolten is attending with Queen Ming of Numara and King Mars of Gohtza - Gongora announces that Tolten was assassinated, and let's it be known that he will become his successor and take the throne of Uhra. After Tolten's death is announced, Gongora boards Grand Staff, and with the help of six Dark Acolytes, launches an attack on Gohtza. This attack decimates a huge portion of the Gohtzan military, as well as killing many of the inhabitants of Gohtza; including the King.
Then back in Uhra unaware of Toltens survival by an emergency transport Gongora claims that Tolten Chose him as his sucessor to the throne, he then plans to sacrafice Sed, the son of Seth, and his pirates to become The King of Uhra. During that time Tolten and Seth attempt to rescue Sed during a Gohtzan reprisal for the attack by Grand Staff. Sed is freed by Seth moments before Gongora creats a multitude of of magic beasts to completely destroy the Gohtzan military. Gongora then Boards Grand Staff and flys it back to The Sea of Baus.
The Immortals arrive at Grand Staff, but fail to meet up with Gongora, who flies off in the upper half. The lower base sinks, and the party jumps off luckily on the White Boa to escape. When a large beam of magical energy emerges from the ocean, the party realises that Gongora intends to use Grand Staff to align the stars with the Tower of Mirrors, and then use Grand Staff to destroy the mirrors, breaking the link between the two worlds. They use the Nautilus to crash into and board the airborne Grand Staff and finally catch up to Gongora, who proceeds to possess Jansen by means of a past contract spell and uses him like a puppet against the party; although Gongora himself assertively ends the fight. Grand Staff then collides with the Tower of Mirrors and Gongora releases Jansen and escapes to the Tower.
Once in the tower, Gongora absorbs the light from the other world and becomes a dark and less human-like figure, whilst the other immortals have become mortals in these rays. The now self-proclaimed god battles the Immortals while the Mortals create a shield of darkness covering the light and weakening Gongora. After the battle, Gongora is severely weakened yet manages to hold the Mortals in the barrier they have created, isolating them to the exposure of the deadly light from the mirrors. Blackmailing Kaim into saving them by destroying the mirrors himself, he is then tackled and restrained by an enraged Seth who, pleading haste to Kaim, sacrifices herself to send Gongora back without escape. Kaim reluctantly destroys the mirror by throwing Gongora's staff into it; sending Gongora, along with Seth, back to the immortal's world and sealing them off permanently.